I've made this little tool to run different mods for each map of your server.
Supposing you have 2 mods and you like both of them, with this you can run them..it's not a hard scripted tool but I think it can be usefull.
However there's a readme that exeplain how to set it up for all your needs...remember I'm a noob in english..I 've done my best to explain it better then ever! lol
link to the file:
http://www.box.net/shared/48tl8unav3
For any bug or problem contact me! tx